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Biology / Unit 7   Bio 1573 short lesson, about 20 seconds

Pairwise-End Sequencing

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The idea

Pairwise-end sequencing reads both ends of each DNA fragment rather than one, supplying more overlap information for reassembling larger genomes.

In practice

Knowing a fragment's start and end sequence constrains where it fits among its neighbors more tightly than knowing one end alone.

Where people slip

Pairwise-end sequencing yields more information per fragment than single-end shotgun sequencing, at the cost of more sequencing reactions.

Your place on the trail

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